PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS74199.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 163aa    MW: 18654.7 Da    PI: 7.112
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS74199.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.18.5e-052401255
                HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                RR ri +a++ Lrel+P++     k +   + +  +++++k+Lq
  EPS74199.1  2 RRLRIAHAIDALRELVPHN-----KEVGREAFVDIVIDHVKHLQ 40
                99****************8.....44666677777777777776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.102139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.42E-4242No hitNo description
SuperFamilySSF474597.33E-7250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-4249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
SRRLRIAHAI DALRELVPHN KEVGREAFVD IVIDHVKHLQ NQMKELCQSR LSGESSSAPV  60
TFIEGHGHYI VQEQMLIGPL EETLGEMFTV YPSAADSLLQ SKGLVVMPMC FADGLCENNE  120
ILIKKKKITY NKLYVVVFRK EWSFFIWGIC NNSIRLSVLE FFN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011079826.18e-48PREDICTED: transcription factor bHLH66-like isoform X2
RefseqXP_011079827.13e-48PREDICTED: transcription factor bHLH66-like isoform X3
TrEMBLS8D3961e-120S8D396_9LAMI; Uncharacterized protein (Fragment)
STRINGPGSC0003DMT4000025125e-32(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA96461617
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.12e-11LJRHL1-like 1
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]